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Structural Biology - Stanford University School of Medicine

I would like to extend a warm welcome to all visitors and candidates for admission to the Department of Structural Biology. Our department was jointly founded
   
Current Opinion in Structural Biology

Current Opinion in Structural Biology contains:
• Over 90 reviews from leading international contributors
• Evaluated reference lists for all articles

Online
• Fully searchable
• Access back issues
• Numerous links

Search and read all issues published since 1994, giving you access to your own reference library without leaving your desk.

The Current Opinion journals were developed out of the recognition that it is increasingly difficult for specialists to keep up to date with the expanding volume of information published in their subject. In Current Opinion in Structural Biology, we help the reader by providing in a systematic manner:

1. The views of experts on current advances in structural biology in a clear and readable form.
2. Evaluations of the most interesting papers, annotated by experts, from the great wealth of original publications.

Division of the subject into sections
The subject of structural biology is divided into twelve major sections, each of which is reviewed once a year. Each issue contains two sections, and the amount of space devoted to each section is related to its importance.

• Folding and binding • Protein-nucleic acid interactions • Theory and simulation • Macromolecular assemblages • Nucleic Acids • Sequences and topology • Membranes • Engineering and design • Carbohydrates and glycoconjugates • Biophysical methods • Catalysis and Regulation • Proteins

Selection of topics to be reviewed
Section Editors, who are major authorities in the field, are appointed by the Editors of the journal. They divide their section into a number of topics, ensuring that the field is comprehensively covered and that all issues of current importance are emphasised. Section Editors commission reviews from authorities on each topic that they have selected.

Reviews
Authors write short review articles in which they present recent developments in their subject, emphasising the aspects that, in their opinion, are most important. In addition, they provide short annotations to the papers that they consider to be most interesting from all those published in their topic over the previous year.

Editorial Overview
Section Editors write a short overview at the beginning of the section to introduce the reviews and to draw the reader's attention to any particularly interesting developments.

Ethics in Publishing: General Statement
The Editor(s) and Publisher of this Journal believe that there are fundamental principles underlying scholarly or professional publishing. While this may not amount to a formal 'code of conduct', these fundamental principles with respect to the authors' paper are that the paper should: i) be the authors' own original work, which has not been previously published elsewhere, ii) reflect the authors' own research and analysis and do so in a truthful and complete manner, iii) properly credit the meaningful contributions of co-authors and co-researchers, iv) not be submitted to more than one journal for consideration, and v) be appropriately placed in the context of prior and existing research. Of equal importance are ethical guidelines dealing with research methods and research funding, including issues dealing with informed consent, research subject privacy rights, conflicts of interest, and sources of funding. While it may not be possible to draft a 'code' that applies adequately to all instances and circumstances, we believe it useful to outline our expectations of authors and procedures that the Journal will employ in the event of questions concerning author conduct. With respect to conflicts of interest, the Publisher now requires authors to declare any conflicts of interest that relate to papers accepted for publication in this Journal. A conflict of interest may exist when an author or the author's institution has a financial or other relationship with other people or organizations that may inappropriately influence the author's work. A conflict can be actual or potential and full disclosure to the Journal is the safest course. All submissions to the Journal must include disclosure of all relationships that could be viewed as presenting a potential conflict of interest. The Journal may use such information as a basis for editorial decisions and may publish such disclosures if they are believed to be important to readers in judging the manuscript. A decision may be made by the Journal not to publish on the basis of the declared conflict.

For more information, please refer to: http://www.elsevier.com/wps/find/authorshome.authors/conflictsofinterest

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How, when and why proteins collapse: the relation to folding

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 19 November 2011Gilad HaranUnfolded proteins under strongly denaturing conditions are highly expanded. However, when the conditions are more close to native, an unfolded protein may collapse to a compact globular structure distinct from the folded state. This transition is akin to the coil–globule transition of homopolymers. Single-molecule FRET experiments have been particularly conducive in revealing the…

Analyzing conformational changes in the transport cycle of EmrE

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 16 November 2011Katherine Henzler-WildmanThe small multidrug resistance transporters represent a unique model system for studying the mechanism of secondary active transport and membrane protein evolution. However, this seemingly simple protein has been highly controversial. Recent studies have provided experimental evidence that EmrE exists as an asymmetric dimer that exchanges between identical inward-facing…

Proteins: histones and chromatin

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 11 November 2011Patrick Cramer, Cynthia Wolberger

Recognition of methylated histones: new twists and variations

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 5 November 2011Sepideh KhorasanizadehHistone tails undergo methylation at their lysines and arginines. These chemical marks act as traffic signals that direct activity of chromatin remodeling complexes to appropriate regions of the genome. A surprisingly diverse group of effector protein modules in chromatin remodeling complexes and their associated factors are involved in the recognition of histone…

The chaperone–histone partnership: for the greater good of histone traffic and chromatin plasticity

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 2 November 2011Maria Hondele, Andreas G LadurnerHistones are highly positively charged proteins that wrap our genome. Their surface properties also make them prone to nonspecific interactions and aggregation. A class of proteins known as histone chaperones is dedicated to safeguard histones by aiding their proper incorporation into nucleosomes. Histone chaperones facilitate ordered nucleosome assembly and…

Electron microscopy studies of nucleosome remodelers

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 29 October 2011Andres E LeschzinerATP-dependent chromatin remodeling complexes, or remodelers, are large protein assemblies that use the energy from ATP hydrolysis to non-covalently modify the structure of nucleosomes, playing a central role in the regulation of chromatin dynamics. Our understanding of the mechanism and regulation of this remodeling activity and the diversity of products that chromatin…

Electron microscopy studies of nucleosome remodelers

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 29 October 2011Andres E LeschzinerATP-dependent chromatin remodeling complexes, or remodelers, are large protein assemblies that use the energy from ATP hydrolysis to non-covalently modify the structure of nucleosomes, playing a central role in the regulation of chromatin dynamics. Our understanding of the mechanism and regulation of this remodeling activity and the diversity of products that chromatin…

Uncovering the intimate relationship between lipids, cholesterol and GPCR activation

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 28 October 2011Joanne Oates, Anthony WattsThe membrane bilayer has a significant influence over the proteins embedded within it. G protein-coupled receptors (GPCRs) form a large group of membrane proteins with a vast array of critical functions, and direct and indirect interactions with the bilayer are thought to control various essential aspects of receptor function. The presence of cholesterol, in…

Uncovering the intimate relationship between lipids, cholesterol and GPCR activation

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 28 October 2011Joanne Oates, Anthony WattsThe membrane bilayer has a significant influence over the proteins embedded within it. G protein-coupled receptors (GPCRs) form a large group of membrane proteins with a vast array of critical functions, and direct and indirect interactions with the bilayer are thought to control various essential aspects of receptor function. The presence of cholesterol, in…

Reading the ubiquitin postal code

Publication year: 2011Source: Current Opinion in Structural Biology, Available online 27 October 2011Jean-François TrempePolyubiquitin chains are assembled through the formation of an isopeptide bond between a lysine side-chain or terminal amino group of a proximal ubiquitin moiety and the carboxy-terminal of a distal ubiquitin moiety. Protein substrates tagged by polyubiquitin chains of different linkages undergo different fates. Many polyubiquitin chain types have been characterized so far,…

 

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